Microarrays Research Today is a free monthly online journal that collates and summarizes the latest research about Microarrays, including details on experiments, designs, statistics, analysis, software.

Volume 2 (2005), Issue 5 (May)

1. Quantitative gene expression analysis by cDNA microarray during liver regeneration after partial hepatectomy in rats.
   Surg Today, 35(5): 396-403. [Abstract] [Full-text]
2. Identification of discrete chromosomal deletion by binary recursive partitioning of microarray differential expression data.
   J Med Genet, 42(5): 416-9. [Abstract] [Full-text]
3. Site-specific immobilization of proteins in a microarray using intein-mediated protein splicing.
   Bioorg Med Chem Lett, 15(10): 2447-51. [Abstract] [Full-text]
4. The pathogenesis of molybdenum cofactor deficiency, its delay by maternal clearance, and its expression pattern in microarray analysis.
   Mol Genet Metab, 85(1): 12-20. [Abstract] [Full-text]
5. Microarray analysis reveals expression regulation of Wnt antagonists in differentiating osteoblasts.
   Bone, 36(5): 803-11. [Abstract] [Full-text]
6. A microarray analysis of wheat grain hardness.
   Theor Appl Genet, 110(7): 1259-67. [Abstract] [Full-text]
7. An entropy-based gene selection method for cancer classification using microarray data.
   BMC Bioinformatics, 6(1): 76. [Abstract] [Full-text]
8. DNA microarray analysis of the heat- and cold-shock stimulons in Yersinia pestis.
   Microbes Infect, 7(3): 335-48. [Abstract] [Full-text]
9. Differential expression of genes within the cochlea as defined by a custom mouse inner ear microarray.
   J Assoc Res Otolaryngol, 6(1): 75-89. [Abstract] [Full-text]
10. Classification of a large microarray data set: algorithm comparison and analysis of drug signatures.
    Genome Res, 15(5): 724-36. [Abstract] [Full-text]
11. Multiple-laboratory comparison of microarray platforms.
    Nat Methods, 2(5): 345-50. [Abstract] [Full-text]
12. Independence and reproducibility across microarray platforms.
    Nat Methods, 2(5): 337-44. [Abstract] [Full-text]
13. An extracellular matrix microarray for probing cellular differentiation.
    Nat Methods, 2(2): 119-25. [Abstract] [Full-text]
14. Microarray-based, high-throughput gene expression profiling of microRNAs.
    Nat Methods, 1(2): 155-61. [Abstract] [Full-text]
15. In situ oligonucleotide synthesis on poly(dimethylsiloxane): a flexible substrate for microarray fabrication.
    Nucleic Acids Res, 33(8): e75. [Abstract] [Full-text]
16. DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens.
    Appl Environ Microbiol, 71(5): 2530-8. [Abstract] [Full-text]
17. Oligonucleotide microarray for identification of Enterococcus species.
    FEMS Microbiol Lett, 246(1): 133-42. [Abstract] [Full-text]
18. Microarray-based detection of 90 antibiotic resistance genes of gram-positive bacteria.
    J Clin Microbiol, 43(5): 2291-302. [Abstract] [Full-text]
19. Nanoliter homogenous ultra-high throughput screening microarray for lead discoveries and IC50 profiling.
    Assay Drug Dev Technol, 3(2): 177-87. [Abstract] [Full-text]
20. Microarray-based classification of diffuse large B-cell lymphoma.
    Eur J Haematol, 74(6): 453-65. [Abstract] [Full-text]
21. MARS: microarray analysis, retrieval, and storage system.
    BMC Bioinformatics, 6(1): 101. [Abstract] [Full-text]
22. Increased DNA microarray hybridization specificity using sscDNA targets.
    BMC Genomics, 6(1): 57. [Abstract] [Full-text]
23. Many accurate small-discriminatory feature subsets exist in microarray transcript data: biomarker discovery.
    BMC Bioinformatics, 6(1): 97. [Abstract] [Full-text]
24. Statistical development and evaluation of microarray gene expression data filters.
    J Comput Biol, 12(4): 482-95. [Abstract] [Full-text]
25. A distinct microarray gene expression profile in primary rat hepatocytes incubated with ursodeoxycholic acid.
    J Hepatol, 42(6): 897-906. [Abstract] [Full-text]
26. Microarray analysis of altered gene expression in murine fibroblasts transformed by nickel(II) to nickel(II)-resistant malignant phenotype.
    Toxicol Appl Pharmacol, 205(1): 1-10. [Abstract] [Full-text]
27. Rapid and reliable detection and identification of GM events using multiplex PCR coupled with oligonucleotide microarray.
    J Agric Food Chem, 53(10): 3789-94. [Abstract] [Full-text]
28. Microarray karyotyping of commercial wine yeast strains reveals shared, as well as unique, genomic signatures.
    BMC Genomics, 6(1): 53. [Abstract] [Full-text]
29. Versatile protein microarray based on carbohydrate-binding modules.
    Proteomics, 5(7): 1806-14. [Abstract] [Full-text]
30. Microarray analysis of phosphatase gene expression in human melanoma.
    Br J Dermatol, 152(5): 925-30. [Abstract] [Full-text]
31. Microarray analysis reveals pivotal divergent mRNA expression profiles early in the development of either compensated ventricular hypertrophy or heart failure.
    Physiol Genomics, 21(3): 314-23. [Abstract] [Full-text]
32. Proof of concept for microarray-based detection of DNA-binding oncogenes in cell extracts.
    Nucleic Acids Res, 33(8): e79. [Abstract] [Full-text]
33. Using a microfluidic device for 1 microl DNA microarray hybridization in 500 s.
    Nucleic Acids Res, 33(8): e78. [Abstract] [Full-text]
34. Microarray expression profiling identifies early signaling transcripts associated with 6-OHDA-induced dopaminergic cell death.
    Antioxid Redox Signal, 7(5): 639-48. [Abstract] [Full-text]
35. Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.
    BMC Bioinformatics, 6(1): 107. [Abstract] [Full-text]
36. Quadratic regression analysis for gene discovery and pattern recognition for non-cyclic short time-course microarray experiments.
    BMC Bioinformatics, 6(1): 106. [Abstract] [Full-text]
37. Expression profiling using human tissues in combination with RNA amplification and microarray analysis: assessment of Langerhans cell histiocytosis.
    Amino Acids, 28(3): 279-290. [Abstract] [Full-text]
38. Tissue MicroArray analyses of pancreatic duodenal homeobox-1 in human cancers.
    World J Surg, 29(3): 334-8. [Abstract] [Full-text]
39. Gene expression profiling during the embryonic development of mouse brain using an oligonucleotide-based microarray system.
    Brain Res Mol Brain Res, 136(1): 231-54. [Abstract] [Full-text]
40. An innovative microarray strategy identities informative molecular markers for the detection of micrometastatic breast cancer.
    Clin Cancer Res, 11(10): 3697-704. [Abstract] [Full-text]
41. Characterizing dye bias in microarray experiments.
    Bioinformatics, 21(10): 2430-7. [Abstract] [Full-text]
42. Integration of GO annotations in Correspondence Analysis: facilitating the interpretation of microarray data.
    Bioinformatics, 21(10): 2424-9. [Abstract] [Full-text]
43. A web-based tool for principal component and significance analysis of microarray data.
    Bioinformatics, 21(10): 2548-9. [Abstract] [Full-text]
44. Collateral missing value imputation: a new robust missing value estimation algorithm for microarray data.
    Bioinformatics, 21(10): 2417-23. [Abstract] [Full-text]
45. Background correction for cDNA microarray images using the TV+L1 model.
    Bioinformatics, 21(10): 2410-6. [Abstract] [Full-text]
46. Bayesian model averaging: development of an improved multi-class, gene selection and classification tool for microarray data.
    Bioinformatics, 21(10): 2394-402. [Abstract] [Full-text]
47. Boosting proportional hazards models using smoothing splines, with applications to high-dimensional microarray data.
    Bioinformatics, 21(10): 2403-9. [Abstract] [Full-text]
48. NY-ESO-1/LAGE-1 coexpression with MAGE-A cancer/testis antigens: a tissue microarray study.
    Int J Cancer, 115(6): 960-6. [Abstract] [Full-text]
49. DNA microarray analysis of Methanosarcina mazei Gö1 reveals adaptation to different methanogenic substrates.
    Mol Genet Genomics, 273(3): 225-39. [Abstract] [Full-text]
50. Oligonucleotide-microarray analysis of peripheral-blood lymphocytes in severe asthma.
    J Lab Clin Med, 145(5): 263-74. [Abstract] [Full-text]
51. Protein microarray for profiling antibody responses to Yersinia pestis live vaccine.
    Infect Immun, 73(6): 3734-9. [Abstract] [Full-text]
52. Immunohistochemical analysis of PTEN in endometrial carcinoma: a tissue microarray study with a comparison of four commercial antibodies in correlation with molecular abnormalities.
    Mod Pathol, 18(5): 719-27. [Abstract] [Full-text]
53. Transcript profiling in plastid arginine tRNA-CCG gene knockout moss: construction of Physcomitrella patens plastid DNA microarray.
    Plant Biol (Stuttg), 7(3): 258-65. [Abstract] [Full-text]
54. CpG Island microarray probe sequences derived from a physical library are representative of CpG Islands annotated on the human genome.
    Nucleic Acids Res, 33(9): 2952-61. [Abstract] [Full-text]
55. Fast and reliable protein microarray production by a new drop-in-drop technique.
    Lab Chip, 5(6): 675-81. [Abstract] [Full-text]
56. Tissue microarray analysis of C-MYC oncogene copy number changes in larynx carcinoma.
    ORL J Otorhinolaryngol Relat Spec, 67(2): 92-5. [Abstract] [Full-text]
57. GandrKB--ontological microarray annotation and visualization.
    Bioinformatics, 21(11): 2785-6. [Abstract] [Full-text]
58. A robust neural networks approach for spatial and intensity-dependent normalization of cDNA microarray data.
    Bioinformatics, 21(11): 2674-83. [Abstract] [Full-text]
59. A practical false discovery rate approach to identifying patterns of differential expression in microarray data.
    Bioinformatics, 21(11): 2684-90. [Abstract] [Full-text]
60. Identification of early tolerance regulator genes induced by allochimeric therapy using microarray-based genomewide scan.
    Transplant Proc, 37(4): 1942-3. [Abstract] [Full-text]
61. Three microarray platforms: an analysis of their concordance in profiling gene expression.
    BMC Genomics, 6(1): 63. [Abstract] [Full-text]
62. Identification of genes whose expressions are enhanced or reduced in baker's yeast during fed-batch culture process using molasses medium by DNA microarray analysis.
    Int J Food Microbiol, 102(1): 63-71. [Abstract] [Full-text]
63. Behavior and the limits of genomic plasticity: power and replicability in microarray analysis of honeybee brains.
    Genes Brain Behav, 4(4): 267-71. [Abstract] [Full-text]
64. A method for fabricating uni-dsDNA microarray chip for analyzing DNA-binding proteins.
    J Biochem Biophys Methods, 63(2): 100-10. [Abstract] [Full-text]

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