Microarrays Research Today is a free monthly online journal that collates and summarizes the latest research about Microarrays, including details on experiments, designs, statistics, analysis, software.

Volume 3 (2006), Issue 1 (January)

1. Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities.
   J Mol Biol, 355(5): 1143-55. [Abstract] [Full-text]
2. Study of hepatitis B virus gene mutations with enzymatic colorimetry-based DNA microarray.
   Clin Biochem, 39(1): 67-73. [Abstract] [Full-text]
3. Annotating nonspecific SAGE tags with microarray data.
   Genomics, 87(1): 173-80. [Abstract] [Full-text]
4. Mouse cDNA microarray analysis uncovers Slug targets in mouse embryonic fibroblasts.
   Genomics, 87(1): 113-8. [Abstract] [Full-text]
5. Microarray analysis of gene expression in adult retinal ganglion cells.
   FEBS Lett, 580(1): 331-5. [Abstract] [Full-text]
6. Using a calibration experiment to assess gene-specific information: full Bayesian and empirical Bayesian models for two-channel microarray data.
   Bioinformatics, 22(1): 50-57. [Abstract] [Full-text]
7. Robust multi-scale clustering of large DNA microarray datasets with the consensus algorithm.
   Bioinformatics, 22(1): 58-67. [Abstract] [Full-text]
8. Integrating time-course microarray gene expression profiles with cytotoxicity for identification of biomarkers in primary rat hepatocytes exposed to cadmium.
   Bioinformatics, 22(1): 77-87. [Abstract] [Full-text]
9. Diagnostic oligonucleotide microarray fingerprinting of Bacillus isolates.
   J Clin Microbiol, 44(1): 244-50. [Abstract] [Full-text]
10. Capsaicin-sensitive sensory neurons regulate myocardial function and gene expression pattern of rat hearts: a DNA microarray study.
    FASEB J, 20(1): 160-2. [Abstract] [Full-text]
11. ArrayQuest: a web resource for the analysis of DNA microarray data.
    BMC Bioinformatics, 6: 287. [Abstract] [Full-text]
12. Molecular research technologies in mitochondrial diseases: The microarray approach.
    IUBMB Life, 57(12): 811-8. [Abstract] [Full-text]
13. Combined microarray analysis of small cell lung cancer reveals altered apoptotic balance and distinct expression signatures of MYC family gene amplification.
    Oncogene, 25(1): 130-8. [Abstract] [Full-text]
14. Prediction of lymph node metastasis in patients with endometrioid endometrial cancer using expression microarray.
    Clin Cancer Res, 12(1): 83-8. [Abstract] [Full-text]
15. Microarray analysis of expressed sequence tags from haustoria of the rust fungus Uromyces fabae.
    Fungal Genet Biol, 43(1): 8-19. [Abstract] [Full-text]
16. Microarray analysis identifies genes preferentially expressed in the lung schistosomulum of Schistosoma mansoni.
    Int J Parasitol, 36(1): 1-8. [Abstract] [Full-text]
17. Design and validation of a partial-genome microarray for transcriptional profiling of the Bradyrhizobium japonicum symbiotic gene region.
    Mol Genet Genomics, 275(1): 55-67. [Abstract] [Full-text]
18. Molecular heterogeneity along the dorsal-ventral axis of the murine hippocampal CA1 field: a microarray analysis of gene expression.
    Neuroscience, 137(1): 177-86. [Abstract] [Full-text]
19. Detection of foot and mouth disease and porcine reproductive and respiratory syndrome viral genes using microarray chip.
    Vet Res Commun, 30(2): 191-204. [Abstract] [Full-text]
20. Identification of significant periodic genes in microarray gene expression data.
    BMC Bioinformatics, 6: 286. [Abstract] [Full-text]
21. Carbohydrate microarray for profiling the antibodies interacting with Globo H tumor antigen.
    Proc Natl Acad Sci U S A, 103(1): 15-20. [Abstract] [Full-text]
22. A microarray data-based semi-kinetic method for predicting quantitative dynamics of genetic networks.
    BMC Bioinformatics, 6: 299. [Abstract] [Full-text]
23. An improved procedure for gene selection from microarray experiments using false discovery rate criterion.
    BMC Bioinformatics, 7(1): 15. [Abstract] [Full-text]
24. Assessing genetic diversity in plasmids from Escherichia coli and Salmonella enterica using a mixed-plasmid microarray.
    J Appl Microbiol, 100(1): 15-28. [Abstract] [Full-text]
25. Microarray analysis of butyrate regulated genes in colonic epithelial cells.
    DNA Cell Biol, 25(1): 49-62. [Abstract] [Full-text]
26. A focused microarray approach to functional glycomics: transcriptional regulation of the glycome.
    Glycobiology, 16(2): 117-31. [Abstract] [Full-text]
27. Microarray screening of suppression subtractive hybridization-PCR cDNA libraries identifies novel RNAs regulated by dehydration in the rat supraoptic nucleus.
    Physiol Genomics, 24(2): 163-72. [Abstract] [Full-text]
28. Using DNA microarray to study human cytomegalovirus gene expression.
    J Virol Methods, 131(2): 202-8. [Abstract] [Full-text]
29. The classification of cancer based on DNA microarray data that uses diverse ensemble genetic programming.
    Artif Intell Med, 36(1): 43-58. [Abstract] [Full-text]
30. WebArray: an online platform for microarray data analysis.
    BMC Bioinformatics, 6: 306. [Abstract] [Full-text]
31. OpWise: Operons aid the identification of differentially expressed genes in bacterial microarray experiments.
    BMC Bioinformatics, 7(1): 19. [Abstract] [Full-text]
32. 17beta-estradiol (betaE2) protects human retinal Müller cell against oxidative stress in vitro: evaluation of its effects on gene expression by cDNA microarray.
    Glia, 53(4): 392-400. [Abstract] [Full-text]
33. Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression.
    Genes Dev, 20(2): 153-8. [Abstract] [Full-text]
34. Deconstructing language by comparative gene expression: from neurobiology to microarray.
    Genes Brain Behav, 5: 54-63. [Abstract] [Full-text]
35. Microarray analysis of gene regulation by oxygen, nitrate, nitrite, FNR, NarL and NarP during anaerobic growth of Escherichia coli: new insights into microbial physiology.
    Biochem Soc Trans, 34: 104-7. [Abstract] [Full-text]
36. Correction: Multiclass classification of microarray data with repeated measurements: application to cancer.
    Genome Biol, 6(13): 405. [Abstract] [Full-text]
37. Microarray-based method for monitoring yeast overexpression strains reveals small-molecule targets in TOR pathway.
    Nat Chem Biol, 2(2): 103-9. [Abstract] [Full-text]
38. Exploration of global gene expression in human liver steatosis by high-density oligonucleotide microarray.
    Lab Invest, 86(2): 154-65. [Abstract] [Full-text]
39. Development and validation of a prototype 16S rRNA-based taxonomic microarray for Alphaproteobacteria.
    Environ Microbiol, 8(2): 289-307. [Abstract] [Full-text]
40. Quenching of microbial samples for increased reliability of microarray data.
    J Microbiol Methods, 64(2): 207-16. [Abstract] [Full-text]
41. Molecular mechanism investigation of cycloheximide-induced hepatocyte apoptosis in rat livers by morphological and microarray analysis.
    Toxicology, 219(1): 175-86. [Abstract] [Full-text]
42. Expression of minichromosome maintenance protein 2 as a marker for proliferation and prognosis in diffuse large B-cell lymphoma: a tissue microarray and clinico-pathological analysis.
    BMC Cancer, 5: 162. [Abstract] [Full-text]
43. Development of a guinea pig immune response-related microarray and its use to define the host response following Mycobacterium bovis BCG vaccination.
    Infect Immun, 74(2): 1436-41. [Abstract] [Full-text]
44. Expression microarray and mouse virulence analysis of four conserved two-component gene regulatory systems in group a streptococcus.
    Infect Immun, 74(2): 1339-51. [Abstract] [Full-text]
45. Microarray-based DNA methylation profiling: technology and applications.
    Nucleic Acids Res, 34(2): 528-42. [Abstract] [Full-text]
46. Expression of Wnt-signaling pathway proteins in intraductal papillary mucinous neoplasms of the pancreas: a tissue microarray analysis.
    Hum Pathol, 37(2): 212-7. [Abstract] [Full-text]
47. Missing value estimation for DNA microarray gene expression data by Support Vector Regression imputation and orthogonal coding scheme.
    BMC Bioinformatics, 7(1): 32. [Abstract] [Full-text]
48. CD44v3 levels in primary cutaneous melanoma are predictive of prognosis: Assessment by the use of tissue microarray.
    Int J Cancer, 118(6): 1460-4. [Abstract] [Full-text]
49. Comparison of algorithms for the analysis of Affymetrix microarray data as evaluated by co-expression of genes in known operons.
    Nucleic Acids Res, 34(2): e8. [Abstract] [Full-text]
50. Microarray analysis of promoter methylation in lung cancers.
    J Hum Genet. [Abstract] [Full-text]
51. Discovery of novel methylation biomarkers in cervical carcinoma by global demethylation and microarray analysis.
    Cancer Epidemiol Biomarkers Prev, 15(1): 114-23. [Abstract] [Full-text]
52. p53 Mutation analysis in breast tumors by a DNA microarray method.
    Cancer Epidemiol Biomarkers Prev, 15(1): 80-5. [Abstract] [Full-text]
53. Insights into gene expression changes impacting B-cell transformation: cross-species microarray analysis of bovine leukemia virus tax-responsive genes in ovine B cells.
    J Virol, 80(4): 1922-38. [Abstract] [Full-text]
54. DNA microarray detection of antimicrobial resistance genes in diverse bacteria.
    Int J Antimicrob Agents, 27(2): 138-51. [Abstract] [Full-text]
55. Classification of microarray data with factor mixture models.
    Bioinformatics, 22(2): 202-8. [Abstract] [Full-text]
56. Pathway recognition and augmentation by computational analysis of microarray expression data.
    Bioinformatics, 22(2): 233-41. [Abstract] [Full-text]
57. Microarray profiling of gene expression patterns in adult male rat brain following acute progesterone treatment.
    Brain Res, 1067(1): 58-66. [Abstract] [Full-text]
58. Investigation of changes in global gene expression in the frontal cortex of early-weaned and socially isolated piglets using microarray and quantitative real-time RT-PCR.
    Brain Res, 1068(1): 7-15. [Abstract] [Full-text]
59. cDNA microarray analysis of cancer associated gene expression profiles in malignant peripheral nerve sheath tumours.
    J Clin Pathol, 59(2): 160-5. [Abstract] [Full-text]
60. Use of microarray biomarkers to identify longevity therapeutics.
    Aging Cell, 5(1): 39-50. [Abstract] [Full-text]
61. Microarray analysis of the transcriptome as a stepping stone towards understanding biological systems: practical considerations and perspectives.
    Plant J, 45(4): 630-50. [Abstract] [Full-text]
62. Robust segmentation and analysis of DNA microarray spots using an adaptative split and merge algorithm.
    Comput Methods Programs Biomed, 81(2): 174-80. [Abstract] [Full-text]
63. Reliability and reproducibility issues in DNA microarray measurements.
    Trends Genet, 22(2): 101-9. [Abstract] [Full-text]
64. A New Specific Gene Expression in Squamous Cell Carcinoma of the Esophagus Detected Using Representational Difference Analysis and cDNA Microarray.
    Oncology, 70(1): 25-33. [Abstract] [Full-text]
65. Tissue microarray analysis of EGFR and erbB2 copy number changes in ovarian tumors.
    Int J Gynecol Cancer, 16(1): 145-51. [Abstract] [Full-text]
66. ELISA microarray technology as a high-throughput system for cancer biomarker validation.
    Expert Rev Proteomics, 3(1): 37-44. [Abstract] [Full-text]

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