Microarrays Research Today is a free monthly online journal that collates and summarizes the latest research about Microarrays, including details on experiments, designs, statistics, analysis, software.

ProMAT: protein microarray analysis tool.

White AM, Daly DS, Varnum SM, Anderson KK, Bollinger N, Zangar RC

Statistical Sciences, Pacific Northwest National Laboratory Richland, WA 99354, USA. amanda.white@pnl.gov

SUMMARY: ProMAT is a software tool for statistically analyzing data from enzyme-linked immunosorbent assay microarray experiments. The software estimates standard curves, sample protein concentrations and their uncertainties for multiple assays. ProMAT generates a set of comprehensive figures for assessing results and diagnosing process quality. The tool is available for Windows or Mac, and is distributed as open-source Java and R code. AVAILABILITY: ProMAT is available at http://www.pnl.gov/statistics/ProMAT. ProMAT requires Java version 1.5.0 and R version 1.9.1 (or more recent versions). ProMAT requires either Windows XP or Mac OS 10.4 or newer versions.

Published 5 May 2006 in Bioinformatics, 22(10): 1278-9.
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