Microarrays Research Today is a free monthly online journal that collates and summarizes the latest research about Microarrays, including details on experiments, designs, statistics, analysis, software.

Volume 4 (2007), Issue 8 (August)

1. Perinatal increases in TGF-{alpha} disrupt the saccular phase of lung morphogenesis and cause remodeling: microarray analysis.
   Am J Physiol Lung Cell Mol Physiol, 293(2): L314-27. [Abstract] [Full-text]
2. Development of a cDNA microarray to identify gene expression of Puccinellia tenuiflora under saline-alkali stress.
   Plant Physiol Biochem, 45(8): 567-76. [Abstract] [Full-text]
3. Comparing two microarray platforms for identifying mutated genes in barley (Hordeum vulgare L.).
   Plant Physiol Biochem, 45(8): 617-22. [Abstract] [Full-text]
4. Development and application of an oligonucleotide microarray for the detection of food-borne bacterial pathogens.
   Appl Microbiol Biotechnol, 76(1): 225-33. [Abstract] [Full-text]
5. A cDNA Microarray for Crassostrea virginica and C. gigas.
   Mar Biotechnol (NY). [Abstract] [Full-text]
6. Whole genome microarray analysis of gene expression in subjects with fragile X syndrome.
   Genet Med, 9(7): 464-72. [Abstract] [Full-text]
7. Multi-category classification using an extreme learning machine for microarray gene expression cancer diagnosis.
   IEEE/ACM Trans Comput Biol Bioinform, 4(3): 485-95. [Abstract] [Full-text]
8. Strategies for identifying statistically significant dense regions in microarray data.
   IEEE/ACM Trans Comput Biol Bioinform, 4(3): 415-29. [Abstract] [Full-text]
9. Development of Two-Stage SVM-RFE Gene Selection Strategy for Microarray Expression Data Analysis.
   IEEE/ACM Trans Comput Biol Bioinform, 4(3): 365-81. [Abstract] [Full-text]
10. Babesia bovis: the development of an expression oligonucleotide microarray.
    Exp Parasitol, 117(1): 93-8. [Abstract] [Full-text]
11. Detecting genetic variation in microarray expression data.
    Genome Res, 17(8): 1228-35. [Abstract] [Full-text]
12. Identification of genes associated with tumorigenesis of retinoblastoma by microarray analysis.
    Genomics, 90(3): 344-53. [Abstract] [Full-text]
13. SAGE tag based cDNA microarray analysis during larval to pupal development and isolation of novel cDNAs in Bombyx mori.
    Genomics, 90(3): 372-9. [Abstract] [Full-text]
14. Development of a sensitive and specific multiplex PCR method combined with DNA microarray primer extension to detect Betapapillomavirus types.
    J Clin Microbiol, 45(8): 2537-44. [Abstract] [Full-text]
15. Development and validation of DNA microarray for genotyping group A rotavirus VP4 (P[4], P[6], P[8], P[9], and P[14]) and VP7 (G1 to G6, G8 to G10, and G12) genes.
    J Clin Microbiol, 45(8): 2641-8. [Abstract] [Full-text]
16. Detection of respiratory viruses and subtype identification of influenza A viruses by GreeneChipResp oligonucleotide microarray.
    J Clin Microbiol, 45(8): 2359-64. [Abstract] [Full-text]
17. Post hoc pattern matching: assigning significance to statistically defined expression patterns in single channel microarray data.
    BMC Bioinformatics, 8: 240. [Abstract] [Full-text]
18. Identification of HCV-1b by low-density cDNA microarray-based assay.
    Curr Microbiol, 55(3): 211-6. [Abstract] [Full-text]
19. Discovering gene expression patterns in time course microarray experiments by ANOVA-SCA.
    Bioinformatics, 23(14): 1792-800. [Abstract] [Full-text]
20. Assessment of survival prediction models based on microarray data.
    Bioinformatics, 23(14): 1768-74. [Abstract] [Full-text]
21. CRCView: a web server for analyzing and visualizing microarray gene expression data using model-based clustering.
    Bioinformatics, 23(14): 1843-5. [Abstract] [Full-text]
22. Annotation and query of tissue microarray data using the NCI Thesaurus.
    BMC Bioinformatics, 8(1): 296. [Abstract] [Full-text]
23. Exploration of PPAR functions by microarray technology-A paradigm for nutrigenomics.
    Biochim Biophys Acta, 1771(8): 1046-64. [Abstract] [Full-text]
24. Possibilistic approach for biclustering microarray data.
    Comput Biol Med, 37(10): 1426-36. [Abstract] [Full-text]
25. Quality control for microarray analysis of human brain samples: The impact of postmortem factors, RNA characteristics, and histopathology.
    J Neurosci Methods, 165(2): 198-209. [Abstract] [Full-text]
26. Cell-specific microarray profiling experiments reveal a comprehensive picture of gene expression in the C. elegans nervous system.
    Genome Biol, 8(7): R135. [Abstract] [Full-text]
27. Tissue microarray-based screening for chromosomal breakpoints affecting the T-cell receptor gene loci in mature T-cell lymphomas.
    J Pathol, 213(1): 99-105. [Abstract] [Full-text]
28. Hybridization kinetics on microarray surfaces.
    Biotechnol J, 2(8): 988-91. [Abstract] [Full-text]
29. Logistic regression for disease classification using microarray data: model selection in a large p and small n case.
    Bioinformatics, 23(15): 1945-51. [Abstract] [Full-text]
30. Clustering microarray-derived gene lists through implicit literature relationships.
    Bioinformatics, 23(15): 1995-2003. [Abstract] [Full-text]
31. Microarray amplification bias: loss of 30% differentially expressed genes due to long probe - poly(A)-tail distances.
    BMC Genomics, 8(1): 277. [Abstract] [Full-text]
32. Identification of human pathogens isolated from blood using microarray hybridisation and signal pattern recognition.
    BMC Microbiol, 7(1): 78. [Abstract] [Full-text]
33. Microarray analysis of transcriptional responses to abscisic acid and osmotic, salt, and drought stress in the moss, Physcomitrella patens.
    New Phytol. [Abstract] [Full-text]
34. Improving lysine production by Corynebacterium glutamicum through DNA microarray-based identification of novel target genes.
    Appl Microbiol Biotechnol, 76(3): 677-89. [Abstract] [Full-text]
35. Identification of palmitate-regulated genes in HepG2 cells by applying microarray analysis.
    Biochim Biophys Acta, 1770(9): 1283-8. [Abstract] [Full-text]
36. Microarray image segmentation using additional dye--an experimental study.
    Mol Cell Probes, 21(5): 321-8. [Abstract] [Full-text]
37. Microarray analysis of the temporal response of skeletal muscle to methylprednisolone: comparative analysis of two dosing regimens.
    Physiol Genomics, 30(3): 282-99. [Abstract] [Full-text]
38. Large-scale integration of cancer microarray data identifies a robust common cancer signature.
    BMC Bioinformatics, 8: 275. [Abstract] [Full-text]
39. Microarray analysis of the cellular pathways involved in the adaptation to and progression of motor neuron injury in the SOD1 G93A mouse model of familial ALS.
    J Neurosci, 27(34): 9201-19. [Abstract] [Full-text]
40. DNA microarray analysis reveals metastasis-associated genes in rat prostate cancer cell lines.
    Biomedica, 27(2): 190-203. [Abstract] [Full-text]
41. Microarray analysis and functional genomics identify novel components of melanopsin signaling.
    Curr Biol, 17(16): 1363-72. [Abstract] [Full-text]
42. Transcription factor binding site identification in yeast: a comparison of high-density oligonucleotide and PCR-based microarray platforms.
    Funct Integr Genomics, 7(4): 335-45. [Abstract] [Full-text]
43. Sample size calculation with dependence adjustment for FDR-control in microarray studies.
    Stat Med, 26(23): 4219-37. [Abstract] [Full-text]
44. Selective discussion and transparency in microarray research findings for cancer outcomes.
    Eur J Cancer, 43(13): 1999-2010. [Abstract] [Full-text]
45. Tissue microarray analysis of connexin expression and its prognostic significance in human breast cancer.
    Cancer Lett, 255(2): 284-94. [Abstract] [Full-text]
46. New insights about host response to smallpox using microarray data.
    BMC Syst Biol, 1(1): 38. [Abstract] [Full-text]
47. Vector edge operators for cDNA microarray spot localization.
    Comput Med Imaging Graph, 31(7): 510-22. [Abstract] [Full-text]
48. Isolation of microarray-grade total RNA, microRNA, and DNA from a single PAXgene blood RNA tube.
    J Mol Diagn, 9(4): 452-8. [Abstract] [Full-text]
49. Microarray analysis of gene expression of mouse hepatocytes of different ploidy.
    Mamm Genome. [Abstract] [Full-text]
50. A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microarray experiments.
    BMC Bioinformatics, 8(1): 317. [Abstract] [Full-text]
51. Non-coding antisense transcription detected by conventional and single-stranded cDNA microarray.
    BMC Genomics, 8(1): 295. [Abstract] [Full-text]
52. Design and evaluation of Actichip, a thematic microarray for the study of the actin cytoskeleton.
    BMC Genomics, 8(1): 294. [Abstract] [Full-text]
53. Development of mitochondria-specific mouse oligonucleotide microarray and validation of data by real-time PCR.
    Mitochondrion, 7(5): 322-9. [Abstract] [Full-text]
54. Hematopoietic stem cell mobilization with G-CSF induces innate inflammation yet suppresses adaptive immune gene expression as revealed by microarray analysis.
    Exp Hematol, 35(9): 1456-65. [Abstract] [Full-text]
55. A microarray analysis of the emergence of embryonic definitive hematopoiesis.
    Exp Hematol, 35(9): 1344-57. [Abstract] [Full-text]

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