Microarrays Research Today is a free monthly online journal that collates and summarizes the latest research about Microarrays, including details on experiments, designs, statistics, analysis, software.

Volume 5 (2008), Issue 2 (February)

1. Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2.
   BMC Med Genomics, 1: 2. [Abstract] [Full-text]
2. Discrimination of Bacillus anthracis and closely related microorganisms by analysis of 16S and 23S rRNA with oligonucleotide microarray.
   Chem Biol Interact, 171(2): 212-35. [Abstract] [Full-text]
3. Identification through microarray gene expression analysis of cellular responses to benzo(a)pyrene and its diol-epoxide that are dependent or independent of p53.
   Carcinogenesis, 29(1): 202-10. [Abstract] [Full-text]
4. Microarray-based DNA resequencing using 3' blocked primers.
   Anal Biochem, 374(1): 41-7. [Abstract] [Full-text]
5. A microarray-based analysis of transcriptional compartmentalization in the alimentary canal of Anopheles gambiae (Diptera: Culicidae) larvae.
   Insect Mol Biol, 17(1): 61-72. [Abstract] [Full-text]
6. A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments.
   Bioinformatics, 24(3): 374-82. [Abstract] [Full-text]
7. Sparse representation and Bayesian detection of genome copy number alterations from microarray data.
   Bioinformatics, 24(3): 309-18. [Abstract] [Full-text]
8. Hybrid huberized support vector machines for microarray classification and gene selection.
   Bioinformatics, 24(3): 412-9. [Abstract] [Full-text]
9. Microarray analysis of gene expression in granulosal cells from persistent follicles in cattle.
   Anim Reprod Sci, 104(3): 405-13. [Abstract] [Full-text]
10. Microarray based Raman spectroscopic detection with gold nanoparticle probes.
    Biosens Bioelectron, 23(7): 1125-30. [Abstract] [Full-text]
11. Increased severity of alcoholic liver injury in female verses male rats: A microarray analysis.
    Exp Mol Pathol, 84(1): 46-58. [Abstract] [Full-text]
12. Methylation pattern analysis using high-throughput microarray of solid-phase hyperbranched rolling circle amplification products.
    Electrophoresis, 29(3): 626-33. [Abstract] [Full-text]
13. Expression of cytokine-associated genes in dendritic cells (DCs): Comparison between adult peripheral blood- and umbilical cord blood-derived DCs by cDNA microarray.
    Immunol Lett, 116(1): 55-63. [Abstract] [Full-text]
14. Model-based variance-stabilizing transformation for Illumina microarray data.
    Nucleic Acids Res, 36(2): e11. [Abstract] [Full-text]
15. AffyTrees: Facilitating Comparative Analysis of Affymetrix Plant Microarray Chips.
    Plant Physiol, 146(2): 377-386. [Abstract] [Full-text]
16. Tissue microarray - a high-throughput molecular analysis in head and neck cancer.
    J Oral Pathol Med, 37(3): 166-76. [Abstract] [Full-text]
17. Serum antibody screening by surface plasmon resonance using a natural glycan microarray.
    Glycoconj J, 25(1): 75-84. [Abstract] [Full-text]
18. Can clinically relevant prognostic subsets of breast cancer patients with four or more involved axillary lymph nodes be identified through immunohistochemical biomarkers? A tissue microarray feasibility study.
    Breast Cancer Res, 10(1): R6. [Abstract] [Full-text]
19. Identification of N-glycan of alpha-fetoprotein by lectin affinity microarray.
    J Cancer Res Clin Oncol. [Abstract] [Full-text]
20. Prognostic value of Bmi-1 oncoprotein expression in NSCLC patients: a tissue microarray study.
    J Cancer Res Clin Oncol. [Abstract] [Full-text]
21. Oligonucleotide Microarray Analysis of Gene Expression Profiles followed by Real-Time Reverse-Transcriptase Polymerase Chain Reaction Assay in Chronic Active Epstein-Barr Virus Infection.
    J Infect Dis. [Abstract] [Full-text]
22. Comparative analysis of microarray data identifies common responses to caloric restriction among mouse tissues.
    Mech Ageing Dev, 129(3): 138-53. [Abstract] [Full-text]
23. Fungal pathogenic nucleic acid detection achieved with a microfluidic microarray device.
    Anal Chim Acta, 610(1): 97-104. [Abstract] [Full-text]
24. An application of protein microarray in the screening of monoclonal antibodies against the oyster mushroom spherical virus.
    Anal Biochem, 374(2): 313-7. [Abstract] [Full-text]
25. Analysis of CD4+ T-cell gene expression in allergic subjects using two different microarray platforms.
    Allergy, 63(3): 366-9. [Abstract] [Full-text]
26. Reconstruction of genetic association networks from microarray data: a partial least squares approach.
    Bioinformatics, 24(4): 561-8. [Abstract] [Full-text]
27. Statistical methodology for the analysis of dye-switch microarray experiments.
    BMC Bioinformatics, 9(1): 98. [Abstract] [Full-text]
28. Development and validation of microarray-based assay for epidemiological study of MRSA.
    Mol Cell Probes, 22(1): 1-13. [Abstract] [Full-text]
29. Microarray-based expression profiling and informatics.
    Curr Opin Biotechnol, 19(1): 26-9. [Abstract] [Full-text]
30. Reproducible and reliable microarray results through quality control: good laboratory proficiency and appropriate data analysis practices are essential.
    Curr Opin Biotechnol, 19(1): 10-8. [Abstract] [Full-text]
31. Bioinformatics applications for pathway analysis of microarray data.
    Curr Opin Biotechnol, 19(1): 50-4. [Abstract] [Full-text]
32. Anticancer activity of (1,2,3,5-tetrahydro-4,1-benzoxazepine-3-yl)-pyrimidines and -purines against the MCF-7 cell line: Preliminary cDNA microarray studies.
    Bioorg Med Chem Lett, 18(4): 1457-60. [Abstract] [Full-text]
33. Antibody microarray analysis of directly labelled complex proteomes.
    Curr Opin Biotechnol, 19(1): 55-61. [Abstract] [Full-text]
34. Human protein atlas and the use of microarray technologies.
    Curr Opin Biotechnol, 19(1): 30-5. [Abstract] [Full-text]
35. High-resolution DNA copy number profiling of malignant peripheral nerve sheath tumors using targeted microarray-based comparative genomic hybridization.
    Clin Cancer Res, 14(4): 1015-24. [Abstract] [Full-text]
36. Efficient identification of a novel cancer/testis antigen for immunotherapy using three-step microarray analysis.
    Cancer Res, 68(4): 1074-82. [Abstract] [Full-text]
37. Deciphering the lithium transcriptome: Microarray profiling of lithium-modulated gene expression in human neuronal cells.
    Neuroscience, 151(4): 1184-1197. [Abstract] [Full-text]
38. Direct identification of chlamydiae from clinical samples using a DNA microarray assay-A validation study.
    Mol Cell Probes, 22(1): 55-64. [Abstract] [Full-text]
39. Microarray Based Diagnosis Profits from Better Documentation of Gene Expression Signatures.
    PLoS Comput Biol, 4(2): e22. [Abstract] [Full-text]
40. Microarray analysis reveals distinctive signaling between the bed nucleus of the stria terminalis, nucleus accumbens, and dorsal striatum.
    Physiol Genomics, 32(3): 283-98. [Abstract] [Full-text]
41. A new method for class prediction based on signed-rank algorithms applied to Affymetrix microarray experiments.
    BMC Bioinformatics, 9: 16. [Abstract] [Full-text]
42. Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data.
    Genome Biol, 9(1): R23. [Abstract] [Full-text]
43. Microarray gene profiling of laser-captured cells: A new tool to study atherosclerosis in mice.
    Atherosclerosis. [Abstract] [Full-text]
44. Analysis of the expression of biomarkers in urinary bladder cancer using a tissue microarray.
    Mol Carcinog. [Abstract] [Full-text]
45. Microarray Analysis of Replicate Populations Selected Against a Wing-Shape Correlation in Drosophila melanogaster.
    Genetics, 178(2): 1093-108. [Abstract] [Full-text]
46. Electrosonic ejector microarray for drug and gene delivery.
    Biomed Microdevices, 10(2): 299-308. [Abstract] [Full-text]
47. Investigating the sensitivity of a fluorescence-based microarray for the detection of fruit-tree viruses.
    J Virol Methods, 148(1): 96-105. [Abstract] [Full-text]
48. Comparative genomic analysis using microarray demonstrates a strong correlation between the presence of the 80-kilobase pathogenicity island and pathogenicity in Kanagawa phenomenon-positive Vibrio parahaemolyticus strains.
    Infect Immun, 76(3): 1016-23. [Abstract] [Full-text]
49. Microarray expression analysis reveals genetic pathways implicated in C621 synphilin-1-mediated toxicity.
    J Neural Transm. [Abstract] [Full-text]
50. Correction of technical bias in clinical microarray data improves concordance with known biological information.
    Genome Biol, 9(2): R26. [Abstract] [Full-text]
51. Apoptotic activity of genistein on human lung adenocarcinoma SPC-A-1 cells and preliminary exploration of its mechanisms using microarray.
    Biomed Pharmacother. [Abstract] [Full-text]
52. Expression profile of liver genes in response to hepatotoxicants identified using a SAGE-based customized DNA microarray system.
    Toxicol Lett, 177(1): 20-30. [Abstract] [Full-text]
53. Isolation and analysis of genes specifically expressed during basidiomatal development in Antrodia cinnamomea by subtractive PCR and cDNA microarray.
    FEMS Microbiol Lett, 280(2): 150-9. [Abstract] [Full-text]
54. DNA microarray analysis of central carbohydrate metabolism: glycolytic/gluconeogenic carbon switch in the hyperthermophilic crenarchaeum Thermoproteus tenax.
    J Bacteriol, 190(6): 2231-8. [Abstract] [Full-text]
55. Microarray analysis of defined Mycobacterium tuberculosis populations using RNA amplification strategies.
    BMC Genomics, 9(1): 94. [Abstract] [Full-text]
56. A mixture model approach to sample size estimation in two- sample comparative microarray experiments.
    BMC Bioinformatics, 9(1): 117. [Abstract] [Full-text]
57. Blood group genotyping for Jk(a)/Jk(b), Fy(a)/Fy(b), S/s, K/k, Kp(a)/Kp(b), Js(a)/Js(b), Co(a)/Co(b), and Lu(a)/Lu(b) with microarray beads.
    Transfusion, 48(3): 505-12. [Abstract] [Full-text]
58. A non-parametric meta-analysis approach for combining independent microarray datasets: application using two microarray datasets pertaining to chronic allograft nephropathy.
    BMC Genomics, 9(1): 98. [Abstract] [Full-text]
59. The genome of Streptomyces rimosus subsp. rimosus shows a novel structure compared to other Streptomyces using DNA/DNA microarray analysis.
    Antonie Van Leeuwenhoek. [Abstract] [Full-text]
60. Sample size calculations based on ranking and selection in microarray experiments.
    Biometrics, 64(1): 217-26. [Abstract] [Full-text]
61. Combining classical trait and microarray data to dissect transcriptional regulation: a case study.
    Theor Appl Genet, 116(5): 683-90. [Abstract] [Full-text]
62. Synthesis of fluorous tags for incorporation of reducing sugars into a quantitative microarray platform.
    Org Lett, 10(5): 785-8. [Abstract] [Full-text]
63. Microarray-based gene expression analysis of human osteoblasts in response to different biomaterials.
    J Biomed Mater Res A. [Abstract] [Full-text]
64. Merging microarray data from separate breast cancer studies provides a robust prognostic test.
    BMC Bioinformatics, 9(1): 125. [Abstract] [Full-text]
65. KUTE-BASE: storing, downloading and exporting MIAME-compliant microarray experiments in minutes rather than hours.
    Bioinformatics, 24(5): 738-40. [Abstract] [Full-text]
66. Microarray analysis using disiloxyl 70mer oligonucleotides.
    Nucleic Acids Res, 36(4): 1334-42. [Abstract] [Full-text]

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